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Canalization and Symmetry in Boolean Models for Genetic Regulatory Networks

机译:遗传调控布尔模型中的渠化与对称性   网络

摘要

Canalization of genetic regulatory networks has been argued to be favored byevolutionary processes due to the stability that it can confer to phenotypeexpression. We explore whether a significant amount of canalization and partialcanalization can arise in purely random networks in the absence of evolutionarypressures. We use a mapping of the Boolean functions in the Kauffman N-K modelfor genetic regulatory networks onto a k-dimensional Ising hypercube to showthat the functions can be divided into different classes strictly due togeometrical constraints. The classes can be counted and their propertiesdetermined using results from group theory and isomer chemistry. We demonstratethat partially canalized functions completely dominate all possible Booleanfunctions, particularly for higher k. This indicates that partial canalizationis extremely common, even in randomly chosen networks, and has implications forhow much information can be obtained in experiments on native state geneticregulatory networks.
机译:遗传调控网络的渠道化被认为受进化过程的青睐,因为它可以赋予表型表达稳定。我们探索在没有进化压力的情况下,纯随机网络中是否可能出现大量的渠化和局部渠化。我们使用Kauffman N-K模型中用于遗传调控网络的布尔函数到k维伊辛超立方体的映射,来证明由于严格的几何约束,这些函数可以分为不同的类。可以使用基团理论和异构体化学的结果对类别进行计数并确定其性质。我们证明了部分运河函数完全支配了所有可能的布尔函数,特别是对于较高的k。这表明,即使在随机选择的网络中,部分渠化也非常普遍,并且对在天然状态基因调控网络上的实验中可以获得多少信息具有影响。

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